EnhancerDB
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  3. rs553944654[chr1:21649787]
Enhancers that have rs553944654[chr1:21649787]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553944654[chr1:21649787]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21645684 21650118 ZNF274 GTRD no Bone Marrow (K562) 107802350
chr1 21649617 21651939 ZNF143 GTRD no Epithelial (MCF-7) 107802351
chr1 21649617 21651939 ZNF143 GTRD no Epithelial (MCF-7) 107802352
chr1 21649780 21649800 RREB1 JASPAR yes 27296164
chr1 21649781 21649787 SP1 TRANSFAC yes 27296166
chr1 21649784 21649794 SP1 JASPAR yes 27296167
chr1 21649785 21649795 SP1 JASPAR yes 27296168
chr1 21649787 21649793 MAZ TRANSFAC yes 27296169
Genes associated with rs553944654[chr1:21649787], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More