EnhancerDB
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  3. rs553948282[chr17:41523573]
Enhancers that have rs553948282[chr17:41523573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs553948282[chr17:41523573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520594 41525787 ZNF143 GTRD no Epithelial (MCF-7) 21760304
chr17 41520797 41523762 ZBTB33 GTRD no Lung (A549) 21760313
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41523013 41524154 AR GTRD no Prostate (PC-3) 21760400
chr17 41523238 41523592 ZNF143 GTRD no Epithelial (MCF-7) 21760401
chr17 41523322 41523642 ZNF274 GTRD no Liver (HepG2) 21760402
chr17 41523363 41525123 ZNF143 GTRD no Epithelial (MCF-7) 21760403
chr17 41523419 41524927 ZNF143 GTRD no Epithelial (MCF-7) 21760404
chr17 41523503 41524516 ZNF274 GTRD no Cervix (HeLa-S3) 21760405
chr17 41523541 41524874 ZNF143 GTRD no Epithelial (MCF-7) 21760406
chr17 41523555 41523575 RREB1 JASPAR yes 54347469
chr17 41523557 41523578 ZNF263 JASPAR yes 54347470
chr17 41523564 41523581 ESR1 JASPAR yes 54347471
chr17 41523568 41523577 RUNX2 JASPAR yes 54347472
Genes associated with rs553948282[chr17:41523573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More