EnhancerDB
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  3. rs553987250[chr17:63021960]
Enhancers that have rs553987250[chr17:63021960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 63011625 63027955 enh4532
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553987250[chr17:63021960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 63021939 63021960 IRF1 JASPAR yes 55340444
chr17 63021953 63021973 RREB1 JASPAR yes 55340446
Genes associated with rs553987250[chr17:63021960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More