EnhancerDB
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  3. rs553992519[chr1:235021195]
Enhancers that have rs553992519[chr1:235021195]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234990369 235041235 enh12797
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs553992519[chr1:235021195]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235020793 235025753 ZNF274 GTRD no Blood (GM12878) 21399907
chr1 235020793 235025871 ZNF274 GTRD no Blood (GM12878) 21399908
chr1 235020834 235021458 ZNF143 GTRD no Epithelial (MCF-7) 21399909
chr1 235020854 235021336 ZNF274 GTRD no Blood (GM12878) 21399910
chr1 235020906 235021267 ZNF274 GTRD no Liver (HepG2) 21399911
chr1 235020955 235021559 ZNF274 GTRD no Liver (HepG2) 21399912
chr1 235020981 235025913 ZNF274 GTRD no Blood (GM12878) 21399913
chr1 235020988 235021284 ZNF143 GTRD no Epithelial (MCF-7) 21399915
chr1 235021006 235021239 ZNF274 GTRD no Bone Marrow (K562) 21399916
chr1 235021113 235021788 ZNF274 GTRD no Bone Marrow (K562) 21399917
chr1 235021184 235021205 REST JASPAR yes 36325750
Genes associated with rs553992519[chr1:235021195], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More