EnhancerDB
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  3. rs553996315[chr19:10833246]
Enhancers that have rs553996315[chr19:10833246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553996315[chr19:10833246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10828833 10833382 TCF7L2 GTRD no Colon (HCT116) 21848909
chr19 10828833 10833382 TCF7L2 GTRD no Colon (HCT116) 108383715
chr19 10833243 10833256 NR2F1 JASPAR yes 112431398
chr19 10833245 10833256 ESRRA JASPAR yes 112431399
chr19 10833245 10833256 ESRRB JASPAR yes 112431400
chr19 10833246 10833254 NR4A2 JASPAR yes 112431401
Genes associated with rs553996315[chr19:10833246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More