EnhancerDB
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  3. rs553996474[chr1:155192589]
Enhancers that have rs553996474[chr1:155192589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs553996474[chr1:155192589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155191923 155197612 ZNF274 GTRD no Cervix (HeLa-S3) 21341379
chr1 155191925 155196309 ZNF274 GTRD no Cervix (HeLa-S3) 21341380
chr1 155192250 155196614 ZNF274 GTRD no Cervix (HeLa-S3) 21341381
chr1 155192353 155195582 ZNF143 GTRD no Epithelial (MCF-7) 21341382
chr1 155192365 155195220 ZNF143 GTRD no Epithelial (MCF-7) 21341383
chr1 155192377 155195191 ZNF143 GTRD no Epithelial (MCF-7) 21341384
chr1 155192407 155197777 ZNF274 GTRD no Cervix (HeLa-S3) 21341385
chr1 155192410 155194044 TCF7L2 GTRD no Colon (HCT116) 21341386
chr1 155192472 155194050 TCF7L2 GTRD no Colon (HCT116) 21341387
chr1 155192480 155195491 TCF7L2 GTRD no Colon (HCT116) 21341388
chr1 155192508 155195258 ZNF143 GTRD no Epithelial (MCF-7) 21341389
chr1 155192515 155195947 ZNF274 GTRD no Cervix (HeLa-S3) 21341390
chr1 155192528 155195611 TCF7L2 GTRD no Colon (HCT116) 21341391
chr1 155192531 155194350 ZNF143 GTRD no Epithelial (MCF-7) 21341392
chr1 155192537 155194783 ZNF143 GTRD no Epithelial (MCF-7) 21341393
chr1 155192571 155195551 ZNF143 GTRD no Epithelial (MCF-7) 21341394
Genes associated with rs553996474[chr1:155192589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More