EnhancerDB
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  3. rs553997963[chr16:89536490]
Enhancers that have rs553997963[chr16:89536490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553997963[chr16:89536490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89536484 89536499 MEF2A JASPAR yes 12347704
chr16 89536485 89536500 MEF2C JASPAR yes 12347705
chr16 89536486 89536498 MEF2A JASPAR yes 12347706
chr16 89536486 89536498 MEF2B JASPAR yes 12347707
chr16 89536486 89536498 MEF2D JASPAR yes 12347708
chr16 89536488 89536492 YY1 TRANSFAC yes 12347709
Genes associated with rs553997963[chr16:89536490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More