EnhancerDB
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  3. rs553998731[chr12:124988383]
Enhancers that have rs553998731[chr12:124988383]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553998731[chr12:124988383]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124988369 124988383 STAT1 JASPAR yes 124385875
chr12 124988375 124988388 ELF3 JASPAR yes 124385877
chr12 124988376 124988387 ELF5 JASPAR yes 124385878
chr12 124988376 124988388 EHF JASPAR yes 124385879
chr12 124988376 124988388 ELF1 JASPAR yes 124385880
chr12 124988378 124988384 ETS1 JASPAR yes 124385881
chr12 124988378 124988388 ELK1 JASPAR yes 124385882
Genes associated with rs553998731[chr12:124988383], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More