EnhancerDB
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  3. rs554004689[chr1:211788898]
Enhancers that have rs554004689[chr1:211788898]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211772625 211795095 enh907
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554004689[chr1:211788898]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211788888 211788907 PAX5 JASPAR yes 35071568
chr1 211788898 211788902 LFA1 TRANSFAC yes 35071569
Genes associated with rs554004689[chr1:211788898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More