EnhancerDB
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  3. rs554015489[chr2:235602271]
Enhancers that have rs554015489[chr2:235602271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235581405 235605475 enh19346
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs554015489[chr2:235602271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235602261 235602272 CDX2 JASPAR yes 81899904
chr2 235602262 235602273 HOXC11 JASPAR yes 81899905
chr2 235602262 235602273 HOXD12 JASPAR yes 81899906
chr2 235602263 235602273 HOXC10 JASPAR yes 81899907
chr2 235602263 235602273 HOXD11 JASPAR yes 81899908
Genes associated with rs554015489[chr2:235602271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More