EnhancerDB
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  3. rs554022965[chr6:43878411]
Enhancers that have rs554022965[chr6:43878411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43862322 43897815 enh23256
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554022965[chr6:43878411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43877480 43878929 POLR2A UCSC Txn Factor no Conserved 108540344
chr6 43878401 43878413 BHLHE23 JASPAR yes 101801744
chr6 43878402 43878412 BHLHE22 JASPAR yes 101801745
chr6 43878402 43878412 OLIG1 JASPAR yes 101801746
chr6 43878402 43878412 OLIG2 JASPAR yes 101801747
chr6 43878402 43878412 OLIG3 JASPAR yes 101801748
Genes associated with rs554022965[chr6:43878411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More