EnhancerDB
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  3. rs554041669[chr2:232460487]
Enhancers that have rs554041669[chr2:232460487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554041669[chr2:232460487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232460476 232460491 RUNX2 JASPAR yes 81723513
chr2 232460485 232460494 ZEB1 JASPAR yes 81723514
chr2 232460486 232460496 TCF4 JASPAR yes 81723515
Genes associated with rs554041669[chr2:232460487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More