EnhancerDB
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  3. rs554050413[chr17:60172822]
Enhancers that have rs554050413[chr17:60172822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs554050413[chr17:60172822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60172801 60172822 IRF1 JASPAR yes 55181334
chr17 60172806 60172827 IRF1 JASPAR yes 55181337
chr17 60172807 60172822 FOXP1 JASPAR yes 55181338
chr17 60172807 60172828 IRF1 JASPAR yes 55181339
chr17 60172808 60172823 STAT2 JASPAR yes 55181340
chr17 60172811 60172832 IRF1 JASPAR yes 55181341
chr17 60172812 60172827 FOXP1 JASPAR yes 55181342
chr17 60172812 60172833 IRF1 JASPAR yes 55181343
chr17 60172816 60172837 IRF1 JASPAR yes 55181344
chr17 60172817 60172832 FOXP1 JASPAR yes 55181345
chr17 60172819 60172834 FOXP1 JASPAR yes 55181346
chr17 60172820 60172835 FOXP1 JASPAR yes 55181347
Genes associated with rs554050413[chr17:60172822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More