EnhancerDB
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  3. rs554109705[chr1:178626348]
Enhancers that have rs554109705[chr1:178626348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs554109705[chr1:178626348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178625563 178626444 ZNF274 GTRD no Liver (HepG2) 21352845
chr1 178625664 178626386 ZNF274 GTRD no Liver (HepG2) 21352849
chr1 178626344 178626349 SP1 TRANSFAC yes 33434560
chr1 178626347 178626361 PLAG1 JASPAR yes 33434561
Genes associated with rs554109705[chr1:178626348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More