EnhancerDB
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  3. rs554123555[chr16:85550133]
Enhancers that have rs554123555[chr16:85550133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554123555[chr16:85550133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85548979 85552235 ZNF274 GTRD no Bone Marrow (K562) 21726853
chr16 85548994 85552184 ZNF274 GTRD no Bone Marrow (K562) 21726854
chr16 85549156 85551670 ZNF274 GTRD no Bone Marrow (K562) 21726856
chr16 85549186 85551685 ZNF143 GTRD no Epithelial (MCF-7) 21726857
chr16 85549192 85551732 ZNF143 GTRD no Epithelial (MCF-7) 21726858
chr16 85549192 85552186 ZNF143 GTRD no Epithelial (MCF-7) 21726859
chr16 85549224 85551006 ZNF274 GTRD no Bone Marrow (K562) 21726860
chr16 85549238 85551380 ZNF274 GTRD no Bone Marrow (K562) 21726861
chr16 85549362 85552152 ZNF274 GTRD no Liver (HepG2) 21726864
chr16 85549599 85552068 ZNF274 GTRD no Bone Marrow (K562) 21726876
chr16 85549631 85550247 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726883
chr16 85549699 85552066 ZNF274 GTRD no Bone Marrow (K562) 21726894
chr16 85549803 85551784 TCF7L2 GTRD no Colon (HCT116) 21726904
chr16 85549835 85550460 ZNF143 GTRD no Epithelial (MCF-7) 21726906
chr16 85549869 85551440 ZNF274 GTRD no Bone Marrow (K562) 21726908
chr16 85550049 85550683 ZNF274 GTRD no Bone Marrow (K562) 21726909
chr16 85550063 85551808 ZNF274 GTRD no Bone Marrow (K562) 21726910
chr16 85550071 85551772 TCF7L2 GTRD no Colon (HCT116) 21726911
chr16 85550110 85550741 ZNF274 GTRD no Bone Marrow (K562) 21726912
chr16 85550119 85552086 ZNF274 GTRD no Bone Marrow (K562) 21726913
Genes associated with rs554123555[chr16:85550133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More