EnhancerDB
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  3. rs554159036[chr17:62979400]
Enhancers that have rs554159036[chr17:62979400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554159036[chr17:62979400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62979389 62979403 ONECUT1 JASPAR yes 55335090
chr17 62979389 62979403 ONECUT2 JASPAR yes 55335091
chr17 62979389 62979403 ONECUT3 JASPAR yes 55335092
chr17 62979389 62979405 POU4F2 JASPAR yes 55335093
chr17 62979389 62979405 POU4F3 JASPAR yes 55335094
chr17 62979390 62979400 CUX2 JASPAR yes 55335095
chr17 62979390 62979400 PAX3 JASPAR yes 55335096
chr17 62979390 62979400 PAX7 JASPAR yes 55335097
chr17 62979391 62979405 POU4F1 JASPAR yes 55335098
chr17 62979396 62979408 FOXC2 JASPAR yes 55335099
chr17 62979397 62979418 IRF1 JASPAR yes 55335100
chr17 62979398 62979402 YY1 TRANSFAC yes 55335101
chr17 62979398 62979419 IRF1 JASPAR yes 55335102
chr17 62979399 62979414 FOXP1 JASPAR yes 55335103
chr17 62979399 62979420 IRF1 JASPAR yes 55335104
Genes associated with rs554159036[chr17:62979400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More