EnhancerDB
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  3. rs554161892[chr12:65024378]
Enhancers that have rs554161892[chr12:65024378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554161892[chr12:65024378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65024369 65024380 USF1 JASPAR yes 121418212
chr12 65024369 65024380 USF2 JASPAR yes 121418213
chr12 65024370 65024380 MAX JASPAR yes 121418214
Genes associated with rs554161892[chr12:65024378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More