EnhancerDB
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  3. rs554163152[chr3:185819960]
Enhancers that have rs554163152[chr3:185819960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185808545 185825535 enh7742
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs554163152[chr3:185819960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185819952 185819967 FOXP1 JASPAR yes 8312495
chr3 185819953 185819974 IRF1 JASPAR yes 8312496
chr3 185819954 185819969 FOXP1 JASPAR yes 8312497
chr3 185819957 185819972 STAT2 JASPAR yes 8312498
Genes associated with rs554163152[chr3:185819960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More