EnhancerDB
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  3. rs554182845[chr2:70301719]
Enhancers that have rs554182845[chr2:70301719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 70293365 70307909 enh5638
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554182845[chr2:70301719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 70301714 70301720 LEF1 TRANSFAC yes 74891498
chr2 70301714 70301720 SOX10 JASPAR yes 74891499
chr2 70301715 70301724 SRY JASPAR yes 74891500
chr2 70301719 70301729 GSX2 JASPAR yes 74891501
Genes associated with rs554182845[chr2:70301719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More