EnhancerDB
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  3. rs554189029[chr2:101730871]
Enhancers that have rs554189029[chr2:101730871]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 101719143 101748878 enh18758
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554189029[chr2:101730871]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 101730866 101730878 FOXI1 JASPAR yes 75787952
chr2 101730867 101730879 FOXC2 JASPAR yes 75787953
chr2 101730868 101730879 FOXC1 JASPAR yes 75787954
chr2 101730869 101730873 YY1 TRANSFAC yes 75787955
chr2 101730871 101730880 SRY JASPAR yes 75787956
Genes associated with rs554189029[chr2:101730871], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More