EnhancerDB
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  3. rs554191226[chr17:38607942]
Enhancers that have rs554191226[chr17:38607942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38602565 38623375 enh52499
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Uterus Pancreas Neural Stem Cells (H9) Heart
chr17 38607821 38607996 vista24718
VISTA
Transcript factors that have rs554191226[chr17:38607942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38604379 38608206 ZNF274 GTRD no Liver (HepG2) 21753892
chr17 38604379 38608206 ZNF274 GTRD no Liver (HepG2) 108255053
chr17 38605789 38608351 ZBTB33 GTRD no Lung (A549) 108255054
chr17 38605827 38608408 ZNF274 GTRD no Liver (HepG2) 21753894
chr17 38605827 38608408 ZNF274 GTRD no Liver (HepG2) 108255056
chr17 38605854 38608333 ZBTB33 GTRD no Lung (A549) 108255057
chr17 38605961 38608242 ZNF274 GTRD no Liver (HepG2) 21753895
chr17 38605961 38608242 ZNF274 GTRD no Liver (HepG2) 108255059
chr17 38607684 38608040 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21753897
chr17 38607684 38608040 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108255062
chr17 38607699 38608606 P63 GTRD no Skin (Keratinocyte) 108255063
chr17 38607711 38607956 EP300 UCSC Txn Factor no Conserved 108255064
chr17 38607720 38607969 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21753898
chr17 38607720 38607969 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108255065
chr17 38607729 38607985 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21753899
chr17 38607729 38607985 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108255066
chr17 38607930 38608280 ZNF143 GTRD no Epithelial (MCF-7) 21753900
chr17 38607930 38608280 ZNF143 GTRD no Epithelial (MCF-7) 108255067
chr17 38607939 38607957 ESR1 JASPAR yes 21235042
chr17 38607939 38607957 ESR1 JASPAR yes 54212143
Genes associated with rs554191226[chr17:38607942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More