EnhancerDB
  1. Home
  2. SNP
  3. rs554203067[chr1:27922772]
Enhancers that have rs554203067[chr1:27922772]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27922522 27922947 vista932
VISTA
Transcript factors that have rs554203067[chr1:27922772]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27922038 27922782 ZNF143 GTRD no Epithelial (MCF-7) 107802597
chr1 27922757 27922772 ZIC3 JASPAR yes 27714115
chr1 27922757 27922772 ZIC4 JASPAR yes 27714116
chr1 27922757 27922772 ZIC3 JASPAR yes 118258794
chr1 27922757 27922772 ZIC4 JASPAR yes 118258795
chr1 27922758 27922772 GLIS2 JASPAR yes 27714117
chr1 27922758 27922772 GLIS3 JASPAR yes 27714118
chr1 27922758 27922772 ZIC1 JASPAR yes 27714119
chr1 27922758 27922772 GLIS2 JASPAR yes 118258796
chr1 27922758 27922772 GLIS3 JASPAR yes 118258797
chr1 27922758 27922772 ZIC1 JASPAR yes 118258798
chr1 27922758 27922773 TFAP2C JASPAR yes 27714120
chr1 27922758 27922773 TFAP2C JASPAR yes 118258799
chr1 27922759 27922772 TFAP2A JASPAR yes 27714122
chr1 27922759 27922772 TFAP2B JASPAR yes 27714123
chr1 27922759 27922772 TFAP2C JASPAR yes 27714124
chr1 27922759 27922772 TFAP2A JASPAR yes 118258801
chr1 27922759 27922772 TFAP2B JASPAR yes 118258802
chr1 27922759 27922772 TFAP2C JASPAR yes 118258803
Genes associated with rs554203067[chr1:27922772], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More