EnhancerDB
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  3. rs554275230[chr1:184452719]
Enhancers that have rs554275230[chr1:184452719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 184446505 184469333 enh12467
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554275230[chr1:184452719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 184452709 184452719 HOXB13 JASPAR yes 33751328
chr1 184452713 184452728 PRDM1 JASPAR yes 33751332
Genes associated with rs554275230[chr1:184452719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More