EnhancerDB
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  3. rs554280656[chr16:85344093]
Enhancers that have rs554280656[chr16:85344093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 85343960 85344187 vista23290
VISTA
Transcript factors that have rs554280656[chr16:85344093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 21723116
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213643
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213644
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213645
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 21723117
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213646
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213647
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213648
chr16 85343530 85345094 ZNF274 GTRD no Bone Marrow (K562) 21723120
chr16 85343530 85345094 ZNF274 GTRD no Bone Marrow (K562) 108213657
chr16 85343530 85345094 ZNF274 GTRD no Bone Marrow (K562) 108213658
chr16 85343530 85345094 ZNF274 GTRD no Bone Marrow (K562) 108213659
chr16 85343747 85344690 TCF7L2 GTRD no Colon (HCT116) 21723121
chr16 85343747 85344690 TCF7L2 GTRD no Colon (HCT116) 108213660
chr16 85343747 85344690 TCF7L2 GTRD no Colon (HCT116) 108213661
chr16 85343800 85345351 TCF7L2 GTRD no Colon (HCT116) 21723122
chr16 85343800 85345351 TCF7L2 GTRD no Colon (HCT116) 108213662
chr16 85343800 85345351 TCF7L2 GTRD no Colon (HCT116) 108213663
chr16 85343800 85345351 TCF7L2 GTRD no Colon (HCT116) 108213664
chr16 85343823 85345163 ZNF143 GTRD no Epithelial (MCF-7) 21723123
chr16 85343823 85345163 ZNF143 GTRD no Epithelial (MCF-7) 108213665
chr16 85343823 85345163 ZNF143 GTRD no Epithelial (MCF-7) 108213666
chr16 85343854 85344224 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723124
chr16 85343854 85344224 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108213667
chr16 85343854 85345163 ZNF143 GTRD no Epithelial (MCF-7) 21723125
chr16 85343854 85345163 ZNF143 GTRD no Epithelial (MCF-7) 108213668
chr16 85343854 85345163 ZNF143 GTRD no Epithelial (MCF-7) 108213669
chr16 85343854 85345165 TCF7L2 GTRD no Colon (HCT116) 21723126
chr16 85343854 85345165 TCF7L2 GTRD no Colon (HCT116) 108213670
chr16 85343854 85345165 TCF7L2 GTRD no Colon (HCT116) 108213671
chr16 85343858 85345192 ZNF143 GTRD no Epithelial (MCF-7) 21723127
chr16 85343858 85345192 ZNF143 GTRD no Epithelial (MCF-7) 108213672
chr16 85343858 85345192 ZNF143 GTRD no Epithelial (MCF-7) 108213673
chr16 85343869 85344253 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723128
chr16 85343869 85344253 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108213674
chr16 85343917 85344193 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723129
chr16 85343917 85344193 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108213675
chr16 85343929 85344133 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723130
chr16 85343929 85344133 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108213676
chr16 85344014 85344258 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723131
chr16 85344014 85344258 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108213677
chr16 85344079 85344100 ZNF263 JASPAR yes 12045525
chr16 85344079 85344100 ZNF263 JASPAR yes 49407470
chr16 85344082 85344097 ZIC3 JASPAR yes 12045528
chr16 85344082 85344097 ZIC3 JASPAR yes 49407473
Genes associated with rs554280656[chr16:85344093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More