EnhancerDB
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  3. rs554313874[chr17:62970492]
Enhancers that have rs554313874[chr17:62970492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554313874[chr17:62970492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62970388 62970984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21780518
chr17 62970485 62970495 POU6F2 JASPAR yes 55333654
chr17 62970486 62970496 EMX1 JASPAR yes 55333655
chr17 62970486 62970496 HOXB3 JASPAR yes 55333656
chr17 62970486 62970496 POU6F1 JASPAR yes 55333657
chr17 62970489 62970493 YY1 TRANSFAC yes 55333658
chr17 62970489 62970497 HOXA5 JASPAR yes 55333659
Genes associated with rs554313874[chr17:62970492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More