EnhancerDB
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  3. rs554329773[chr15:62399258]
Enhancers that have rs554329773[chr15:62399258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 62394745 62423415 enh31435
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554329773[chr15:62399258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 62399255 62399270 FOXP1 JASPAR yes 23878588
chr15 62399256 62399271 FOXP1 JASPAR yes 23878589
chr15 62399257 62399272 FOXP1 JASPAR yes 23878590
chr15 62399257 62399278 IRF1 JASPAR yes 23878591
chr15 62399258 62399273 FOXP1 JASPAR yes 23878592
chr15 62399258 62399279 IRF1 JASPAR yes 23878593
Genes associated with rs554329773[chr15:62399258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More