EnhancerDB
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  3. rs554346681[chr12:50940165]
Enhancers that have rs554346681[chr12:50940165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554346681[chr12:50940165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50940155 50940167 POU2F1 JASPAR yes 120841843
chr12 50940155 50940168 POU3F3 JASPAR yes 120841844
chr12 50940156 50940168 POU3F1 JASPAR yes 120841845
chr12 50940156 50940168 POU3F2 JASPAR yes 120841846
chr12 50940156 50940169 POU2F2 JASPAR yes 120841847
chr12 50940157 50940166 POU5F1B JASPAR yes 120841848
Genes associated with rs554346681[chr12:50940165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More