EnhancerDB
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  3. rs554371924[chr17:38668253]
Enhancers that have rs554371924[chr17:38668253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554371924[chr17:38668253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38667098 38668609 TCF7L2 GTRD no Colon (HCT116) 21754218
chr17 38667122 38668303 ZNF143 GTRD no Epithelial (MCF-7) 21754219
chr17 38667144 38668337 ZNF274 GTRD no Bone Marrow (K562) 21754220
chr17 38667166 38668327 ZNF274 GTRD no Liver (HepG2) 21754221
chr17 38667175 38668270 ZNF274 GTRD no Liver (HepG2) 21754222
chr17 38667266 38668345 ZNF274 GTRD no Blood (GM12878) 21754234
chr17 38667269 38668474 ZNF274 GTRD no Cervix (HeLa-S3) 21754235
chr17 38667273 38668440 ZNF274 GTRD no Liver (HepG2) 21754240
chr17 38667275 38668262 ZNF274 GTRD no Liver (HepG2) 21754241
chr17 38667296 38668457 ZNF274 GTRD no Liver (HepG2) 21754261
chr17 38667311 38668311 ZNF143 GTRD no Epithelial (MCF-7) 21754265
chr17 38668012 38668672 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754319
chr17 38668220 38668880 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754320
Genes associated with rs554371924[chr17:38668253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More