EnhancerDB
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  3. rs554374149[chr2:224594249]
Enhancers that have rs554374149[chr2:224594249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224585628 224603006 enh19263
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554374149[chr2:224594249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224594242 224594263 IRF1 JASPAR yes 81281844
chr2 224594247 224594262 FOXP1 JASPAR yes 81281845
chr2 224594248 224594263 FOXP1 JASPAR yes 81281846
Genes associated with rs554374149[chr2:224594249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More