EnhancerDB
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  3. rs554381[chr1:234821266]
Enhancers that have rs554381[chr1:234821266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234809879 234823595 enh12794
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Stomach Placenta Adrenal Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs554381[chr1:234821266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234821252 234821267 LEF1 JASPAR yes 36302654
chr1 234821253 234821267 TCF7L2 JASPAR yes 36302655
chr1 234821262 234821277 STAT2 JASPAR yes 36302658
chr1 234821263 234821274 ELF5 JASPAR yes 36302659
chr1 234821263 234821276 ELF1 JASPAR yes 36302660
chr1 234821263 234821277 SPI1 JASPAR yes 36302661
chr1 234821263 234821277 SPIC JASPAR yes 36302662
chr1 234821264 234821271 SPI1 JASPAR yes 36302663
chr1 234821264 234821272 FEV JASPAR yes 36302664
chr1 234821266 234821271 ETS2 TRANSFAC yes 36302665
Genes associated with rs554381[chr1:234821266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More