EnhancerDB
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  3. rs554397727[chr1:206883277]
Enhancers that have rs554397727[chr1:206883277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs554397727[chr1:206883277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206883270 206883284 EBF1 JASPAR yes 34820597
chr1 206883271 206883282 EBF1 JASPAR yes 34820598
chr1 206883272 206883284 TFAP2A JASPAR yes 34820599
chr1 206883272 206883284 TFAP2B JASPAR yes 34820600
chr1 206883272 206883284 TFAP2C JASPAR yes 34820601
chr1 206883272 206883285 TFAP2A JASPAR yes 34820602
chr1 206883272 206883285 TFAP2B JASPAR yes 34820603
chr1 206883272 206883285 TFAP2C JASPAR yes 34820604
chr1 206883272 206883287 TFAP2C JASPAR yes 34820605
chr1 206883273 206883284 EBF1 JASPAR yes 34820606
chr1 206883273 206883286 TFAP2A JASPAR yes 34820607
chr1 206883273 206883286 TFAP2B JASPAR yes 34820608
chr1 206883273 206883286 TFAP2C JASPAR yes 34820609
Genes associated with rs554397727[chr1:206883277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More