EnhancerDB
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  3. rs554423069[chr17:34222790]
Enhancers that have rs554423069[chr17:34222790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs554423069[chr17:34222790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34222769 34223350 ZNF274 GTRD no Bone Marrow (K562) 108251386
chr17 34222772 34223566 SOX2 GTRD no Neural Stem Cells (H9) 21751096
chr17 34222772 34223566 SOX2 GTRD no Neural Stem Cells (H9) 108251387
chr17 34222782 34222797 AR JASPAR yes 54020207
chr17 34222786 34222800 JUN JASPAR yes 54020208
chr17 34222789 34222800 FOSL2 JASPAR yes 54020209
chr17 34222789 34222800 JUNB JASPAR yes 54020210
chr17 34222790 34222801 FOSL1 JASPAR yes 54020211
chr17 34222790 34222801 JUND JASPAR yes 54020212
Genes associated with rs554423069[chr17:34222790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More