EnhancerDB
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  3. rs554443223[chr1:2187607]
Enhancers that have rs554443223[chr1:2187607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554443223[chr1:2187607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2187592 2187607 JUND JASPAR yes 26227912
chr1 2187593 2187607 RORA JASPAR yes 26227914
chr1 2187600 2187614 GATA2 JASPAR yes 26227918
chr1 2187604 2187612 GATA3 JASPAR yes 26227919
chr1 2187604 2187612 GATA5 JASPAR yes 26227920
Genes associated with rs554443223[chr1:2187607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More