EnhancerDB
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  3. rs554476651[chr5:90460705]
Enhancers that have rs554476651[chr5:90460705]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90450185 90481862 enh22423
Prostate (PC-3) Brain (SK-N-MC) Esophagus Liver Lung (A549) Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs554476651[chr5:90460705]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90460694 90460709 MEF2A JASPAR yes 64171418
chr5 90460697 90460707 GSX1 JASPAR yes 64171419
chr5 90460697 90460707 GSX2 JASPAR yes 64171420
chr5 90460698 90460706 LMX1A JASPAR yes 64171421
chr5 90460698 90460706 LMX1B JASPAR yes 64171422
chr5 90460698 90460706 NKX6-1 JASPAR yes 64171423
chr5 90460698 90460706 NKX6-2 JASPAR yes 64171424
chr5 90460698 90460706 VAX1 JASPAR yes 64171425
chr5 90460698 90460706 VAX2 JASPAR yes 64171426
chr5 90460698 90460706 VSX1 JASPAR yes 64171427
chr5 90460698 90460706 VSX2 JASPAR yes 64171428
Genes associated with rs554476651[chr5:90460705], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More