EnhancerDB
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Enhancers that have rs554477516[chr11:65260860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65232865 65270235 enh1826
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554477516[chr11:65260860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65259103 65261117 POLR2A UCSC Txn Factor no Conserved 107979225
chr11 65259103 65261117 POLR2A UCSC Txn Factor no Conserved 107979226
chr11 65259103 65261117 POLR2A UCSC Txn Factor no Conserved 107979227
chr11 65259785 65261117 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494103
chr11 65259785 65261117 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979338
chr11 65259785 65261117 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979339
chr11 65260329 65260923 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21494127
chr11 65260329 65260923 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107979373
chr11 65260343 65260933 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494130
chr11 65260343 65260933 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979376
chr11 65260416 65260924 SOX2 GTRD no Neural Stem Cells (H9) 21494139
chr11 65260416 65260924 SOX2 GTRD no Neural Stem Cells (H9) 107979385
chr11 65260438 65260908 RELA UCSC Txn Factor no Conserved 107979389
chr11 65260453 65261083 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494142
chr11 65260453 65261083 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979390
chr11 65260467 65260877 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494144
chr11 65260467 65260877 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979392
chr11 65260478 65260862 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494145
chr11 65260478 65260862 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979393
chr11 65260481 65261165 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494146
chr11 65260481 65261165 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979394
chr11 65260496 65261016 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494147
chr11 65260496 65261016 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979395
chr11 65260501 65261017 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494148
chr11 65260501 65261017 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979396
chr11 65260502 65260917 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494149
chr11 65260502 65260917 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979397
chr11 65260528 65260908 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494151
chr11 65260528 65260908 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979399
chr11 65260531 65260931 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494152
chr11 65260531 65260931 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979400
chr11 65260554 65261144 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494154
chr11 65260554 65261144 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979402
chr11 65260580 65260876 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494156
chr11 65260580 65260876 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979404
chr11 65260581 65260901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494157
chr11 65260581 65260901 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979405
chr11 65260584 65260894 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494158
chr11 65260584 65260894 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979406
chr11 65260587 65260877 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494159
chr11 65260587 65260877 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979407
chr11 65260595 65260935 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494160
chr11 65260595 65260935 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979408
chr11 65260596 65260876 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494161
chr11 65260596 65260876 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979409
chr11 65260630 65260877 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494162
chr11 65260630 65260877 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979410
chr11 65260665 65260890 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494163
chr11 65260665 65260890 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979411
chr11 65260682 65261118 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494164
chr11 65260682 65261118 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979412
chr11 65260699 65260881 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21494165
chr11 65260699 65260881 EGR1 UCSC Txn Factor no Conserved 107979413
chr11 65260699 65260881 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107979414
chr11 65260721 65260874 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494166
chr11 65260721 65260874 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979415
chr11 65260795 65263293 ZNF274 GTRD no Blood (GM12878) 21494168
chr11 65260795 65263293 ZNF274 GTRD no Blood (GM12878) 107979417
chr11 65260795 65263293 ZNF274 GTRD no Blood (GM12878) 107979418
chr11 65260795 65263293 ZNF274 GTRD no Blood (GM12878) 107979419
chr11 65260806 65263625 ZNF143 GTRD no Epithelial (MCF-7) 21494169
chr11 65260806 65263625 ZNF143 GTRD no Epithelial (MCF-7) 107979420
chr11 65260806 65263625 ZNF143 GTRD no Epithelial (MCF-7) 107979421
chr11 65260806 65263625 ZNF143 GTRD no Epithelial (MCF-7) 107979422
chr11 65260816 65263278 ZNF274 GTRD no Bone Marrow (K562) 21494170
chr11 65260816 65263278 ZNF274 GTRD no Bone Marrow (K562) 107979423
chr11 65260816 65263278 ZNF274 GTRD no Bone Marrow (K562) 107979424
chr11 65260816 65263278 ZNF274 GTRD no Bone Marrow (K562) 107979425
chr11 65260820 65263308 ZNF274 GTRD no Blood (GM12878) 21494171
chr11 65260820 65263308 ZNF274 GTRD no Blood (GM12878) 107979426
chr11 65260820 65263308 ZNF274 GTRD no Blood (GM12878) 107979427
chr11 65260820 65263308 ZNF274 GTRD no Blood (GM12878) 107979428
chr11 65260822 65262936 ZBTB33 GTRD no Lung (A549) 107979429
chr11 65260822 65262936 ZBTB33 GTRD no Lung (A549) 107979430
chr11 65260822 65262936 ZBTB33 GTRD no Lung (A549) 107979431
chr11 65260842 65260860 ESR2 JASPAR yes 39323317
chr11 65260842 65260860 ESR2 JASPAR yes 114086941
chr11 65260845 65263322 ZNF274 GTRD no Blood (GM12878) 21494172
chr11 65260845 65263322 ZNF274 GTRD no Blood (GM12878) 107979432
chr11 65260845 65263322 ZNF274 GTRD no Blood (GM12878) 107979433
chr11 65260845 65263322 ZNF274 GTRD no Blood (GM12878) 107979434
chr11 65260849 65260862 HSF2 JASPAR yes 39323321
chr11 65260849 65260862 HSF2 JASPAR yes 114086945
Genes associated with rs554477516[chr11:65260860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More