EnhancerDB
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  3. rs554479194[chr16:89387632]
Enhancers that have rs554479194[chr16:89387632]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 89384737 89387643 vista670
VISTA
Transcript factors that have rs554479194[chr16:89387632]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89387628 89387648 ESR1 JASPAR yes 12330844
chr16 89387630 89387641 ESRRA JASPAR yes 12330845
chr16 89387630 89387641 ESRRB JASPAR yes 12330846
chr16 89387631 89387649 ESR2 JASPAR yes 12330847
chr16 89387632 89387640 NR4A2 JASPAR yes 12330848
Genes associated with rs554479194[chr16:89387632], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More