EnhancerDB
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  3. rs554480765[chr1:207478225]
Enhancers that have rs554480765[chr1:207478225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 207468191 207488755 enh12602
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs554480765[chr1:207478225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 207477923 207478319 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373599
chr1 207478067 207478307 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373602
chr1 207478073 207478488 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373603
chr1 207478079 207478339 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373604
chr1 207478082 207478402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373605
chr1 207478104 207478408 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373606
chr1 207478146 207478516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373607
chr1 207478148 207478473 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373608
chr1 207478151 207478547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373609
chr1 207478152 207478516 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373610
chr1 207478158 207478394 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373611
chr1 207478159 207478535 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373612
chr1 207478171 207478547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373613
chr1 207478173 207478557 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373614
chr1 207478196 207478526 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21373615
chr1 207478215 207478225 HOXA13 JASPAR yes 34854948
chr1 207478215 207478225 HOXB13 JASPAR yes 34854949
chr1 207478215 207478225 HOXD13 JASPAR yes 34854950
chr1 207478215 207478226 HOXA10 JASPAR yes 34854951
chr1 207478216 207478225 CDX1 JASPAR yes 34854952
chr1 207478216 207478227 CDX2 JASPAR yes 34854953
chr1 207478217 207478231 ONECUT2 JASPAR yes 34854954
chr1 207478217 207478231 ONECUT3 JASPAR yes 34854955
chr1 207478220 207478229 SRY JASPAR yes 34854956
chr1 207478223 207478238 FOXA1 JASPAR yes 34854957
chr1 207478224 207478236 FOXI1 JASPAR yes 34854958
chr1 207478224 207478239 FOXP1 JASPAR yes 34854959
chr1 207478225 207478237 FOXC2 JASPAR yes 34854960
chr1 207478225 207478239 ONECUT2 JASPAR yes 34854961
chr1 207478225 207478239 ONECUT3 JASPAR yes 34854962
Genes associated with rs554480765[chr1:207478225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More