EnhancerDB
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  3. rs554501638[chr2:27943044]
Enhancers that have rs554501638[chr2:27943044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr2 27942982 27943239 vista30786
VISTA
Transcript factors that have rs554501638[chr2:27943044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27942936 27943362 EP300 UCSC Txn Factor no Conserved 108431536
chr2 27942964 27943420 FOSL2 UCSC Txn Factor no Conserved 108431537
chr2 27942991 27943277 NR3C1 UCSC Txn Factor no Conserved 108431538
chr2 27943002 27943282 CREB1 UCSC Txn Factor no Conserved 108431539
chr2 27943003 27943343 JUN UCSC Txn Factor no Conserved 108431540
chr2 27943018 27943380 FOS UCSC Txn Factor no Conserved 108431541
chr2 27943032 27943052 RREB1 JASPAR yes 22022393
chr2 27943032 27943052 RREB1 JASPAR yes 72584875
chr2 27943039 27943059 RREB1 JASPAR yes 22022394
chr2 27943039 27943059 RREB1 JASPAR yes 72584876
chr2 27943040 27943309 CEBPB UCSC Txn Factor no Conserved 108431542
chr2 27943042 27943050 TBX5 JASPAR yes 22022395
chr2 27943042 27943050 TBX5 JASPAR yes 72584877
chr2 27943043 27943063 RREB1 JASPAR yes 22022396
chr2 27943043 27943063 RREB1 JASPAR yes 72584878
Genes associated with rs554501638[chr2:27943044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More