EnhancerDB
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  3. rs554532660[chr2:28883513]
Enhancers that have rs554532660[chr2:28883513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554532660[chr2:28883513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28883505 28883517 GRHL1 JASPAR yes 72665827
chr2 28883506 28883516 TFCP2 JASPAR yes 72665828
chr2 28883508 28883528 RREB1 JASPAR yes 72665829
chr2 28883509 28883529 RREB1 JASPAR yes 72665830
chr2 28883512 28883532 RREB1 JASPAR yes 72665831
chr2 28883513 28883533 RREB1 JASPAR yes 72665832
Genes associated with rs554532660[chr2:28883513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More