EnhancerDB
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  3. rs554535877[chr1:109785528]
Enhancers that have rs554535877[chr1:109785528]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109778260 109787295 enh27060
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Ovary Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs554535877[chr1:109785528]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109785518 109785539 IRF1 JASPAR yes 31419089
chr1 109785520 109785535 PRDM1 JASPAR yes 31419090
chr1 109785520 109785535 STAT2 JASPAR yes 31419091
chr1 109785521 109785535 SPIC JASPAR yes 31419092
chr1 109785521 109785535 STAT1 JASPAR yes 31419093
chr1 109785522 109785537 IRF9 JASPAR yes 31419094
chr1 109785522 109785543 IRF1 JASPAR yes 31419095
chr1 109785523 109785538 FOXP1 JASPAR yes 31419096
chr1 109785523 109785544 IRF1 JASPAR yes 31419097
chr1 109785524 109785545 IRF1 JASPAR yes 31419098
chr1 109785525 109785540 FOXP1 JASPAR yes 31419099
chr1 109785525 109785546 IRF1 JASPAR yes 31419100
chr1 109785526 109785547 IRF1 JASPAR yes 31419101
chr1 109785527 109785542 FOXP1 JASPAR yes 31419102
chr1 109785527 109785548 IRF1 JASPAR yes 31419103
chr1 109785528 109785543 FOXP1 JASPAR yes 31419104
Genes associated with rs554535877[chr1:109785528], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More