EnhancerDB
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  3. rs554553462[chr12:110739430]
Enhancers that have rs554553462[chr12:110739430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110736965 110760635 enh14987
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554553462[chr12:110739430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110739421 110739436 LEF1 JASPAR yes 123690211
chr12 110739421 110739442 ZNF263 JASPAR yes 123690212
chr12 110739422 110739436 TCF7L2 JASPAR yes 123690214
chr12 110739425 110739431 LEF1 TRANSFAC yes 123690215
chr12 110739425 110739431 SOX10 JASPAR yes 123690216
Genes associated with rs554553462[chr12:110739430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More