EnhancerDB
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  3. rs554599076[chr1:52015904]
Enhancers that have rs554599076[chr1:52015904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs554599076[chr1:52015904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52015886 52015907 MAFG JASPAR yes 28849062
chr1 52015901 52015911 MEF2A JASPAR yes 28849063
chr1 52015902 52015906 TEAD2 TRANSFAC yes 28849064
chr1 52015902 52015907 TBP TRANSFAC yes 28849065
Genes associated with rs554599076[chr1:52015904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More