EnhancerDB
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Enhancers that have rs554618138[chr17:38754201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
chr17 38754136 38754450 vista24744
VISTA
Transcript factors that have rs554618138[chr17:38754201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38753662 38754258 ZBTB33 GTRD no Brain (SK-N-SH) 108257374
chr17 38753710 38754260 ZBTB33 GTRD no Lung (A549) 108257375
chr17 38753740 38754399 ZNF274 GTRD no Bone Marrow (K562) 108257376
chr17 38753938 38754528 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756545
chr17 38753938 38754528 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257377
chr17 38754073 38754429 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756546
chr17 38754073 38754429 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257378
chr17 38754123 38754533 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756547
chr17 38754123 38754533 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257379
chr17 38754173 38754502 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756548
chr17 38754173 38754502 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257380
chr17 38754186 38754444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756549
chr17 38754186 38754444 MEF2A UCSC Txn Factor no Conserved 108257381
chr17 38754186 38754444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257382
chr17 38754195 38754425 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756550
chr17 38754195 38754425 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257383
chr17 38754199 38754204 TFAP2A TRANSFAC yes 21236519
chr17 38754199 38754204 TFAP2A TRANSFAC yes 54230052
chr17 38754199 38754205 MZF1 JASPAR yes 21236520
chr17 38754199 38754205 MZF1 JASPAR yes 54230053
chr17 38754199 38754220 ZNF263 JASPAR yes 21236521
chr17 38754199 38754220 ZNF263 JASPAR yes 54230054
Genes associated with rs554618138[chr17:38754201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More