EnhancerDB
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  3. rs554628626[chr16:70460100]
Enhancers that have rs554628626[chr16:70460100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 70459605 70472113 enh4121
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554628626[chr16:70460100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 70460080 70460101 IRF1 JASPAR yes 11317362
chr16 70460081 70460102 IRF1 JASPAR yes 11317363
chr16 70460082 70460103 IRF1 JASPAR yes 11317365
chr16 70460083 70460104 IRF1 JASPAR yes 11317367
chr16 70460084 70460105 IRF1 JASPAR yes 11317369
chr16 70460085 70460100 FOXP1 JASPAR yes 11317370
chr16 70460085 70460106 IRF1 JASPAR yes 11317371
chr16 70460086 70460101 FOXP1 JASPAR yes 11317372
chr16 70460086 70460107 IRF1 JASPAR yes 11317373
chr16 70460087 70460102 FOXP1 JASPAR yes 11317374
chr16 70460087 70460108 IRF1 JASPAR yes 11317375
chr16 70460088 70460103 FOXP1 JASPAR yes 11317376
chr16 70460088 70460109 IRF1 JASPAR yes 11317377
chr16 70460089 70460104 FOXP1 JASPAR yes 11317378
chr16 70460089 70460110 IRF1 JASPAR yes 11317379
chr16 70460090 70460105 FOXP1 JASPAR yes 11317380
chr16 70460090 70460111 IRF1 JASPAR yes 11317381
chr16 70460091 70460106 FOXP1 JASPAR yes 11317382
chr16 70460091 70460112 IRF1 JASPAR yes 11317383
chr16 70460092 70460107 FOXP1 JASPAR yes 11317384
chr16 70460092 70460112 RREB1 JASPAR yes 11317385
chr16 70460092 70460113 IRF1 JASPAR yes 11317386
chr16 70460093 70460108 FOXP1 JASPAR yes 11317387
chr16 70460093 70460114 IRF1 JASPAR yes 11317388
chr16 70460094 70460109 FOXP1 JASPAR yes 11317389
chr16 70460095 70460110 FOXP1 JASPAR yes 11317390
chr16 70460096 70460111 FOXP1 JASPAR yes 11317391
chr16 70460097 70460112 FOXP1 JASPAR yes 11317392
chr16 70460099 70460114 FOXP1 JASPAR yes 11317393
Genes associated with rs554628626[chr16:70460100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More