EnhancerDB
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  3. rs554638729[chr17:39001162]
Enhancers that have rs554638729[chr17:39001162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39001145 39015955 enh17144
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs554638729[chr17:39001162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39001146 39001162 SOX8 JASPAR yes 54239319
chr17 39001155 39001175 TBX19 JASPAR yes 54239320
chr17 39001157 39001173 T JASPAR yes 54239321
Genes associated with rs554638729[chr17:39001162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More