EnhancerDB
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  3. rs554641110[chr1:2195688]
Enhancers that have rs554641110[chr1:2195688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2194994 2213473 enh11424
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs554641110[chr1:2195688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2195676 2195692 SOX8 JASPAR yes 26228910
chr1 2195676 2195697 IRF1 JASPAR yes 26228911
chr1 2195678 2195693 PRDM1 JASPAR yes 26228912
chr1 2195678 2195693 STAT2 JASPAR yes 26228913
chr1 2195679 2195693 STAT1 JASPAR yes 26228914
chr1 2195680 2195692 IRF1 JASPAR yes 26228915
chr1 2195680 2195694 IRF7 JASPAR yes 26228916
chr1 2195680 2195694 IRF8 JASPAR yes 26228917
chr1 2195680 2195695 IRF9 JASPAR yes 26228918
Genes associated with rs554641110[chr1:2195688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More