EnhancerDB
  1. Home
  2. SNP
  3. rs554668197[chr4:83707956]
Enhancers that have rs554668197[chr4:83707956]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 83692085 83711830 enh8042
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554668197[chr4:83707956]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 83707942 83707957 FOXP1 JASPAR yes 90878853
chr4 83707943 83707958 FOXP1 JASPAR yes 90878854
chr4 83707944 83707959 FOXP1 JASPAR yes 90878856
chr4 83707944 83707965 IRF1 JASPAR yes 90878857
chr4 83707945 83707960 FOXP1 JASPAR yes 90878858
chr4 83707945 83707966 IRF1 JASPAR yes 90878859
chr4 83707946 83707961 FOXP1 JASPAR yes 90878860
chr4 83707946 83707967 IRF1 JASPAR yes 90878861
chr4 83707947 83707962 FOXP1 JASPAR yes 90878862
chr4 83707947 83707968 IRF1 JASPAR yes 90878863
chr4 83707948 83707963 FOXP1 JASPAR yes 90878864
chr4 83707948 83707969 IRF1 JASPAR yes 90878865
chr4 83707949 83707964 FOXP1 JASPAR yes 90878866
chr4 83707949 83707970 IRF1 JASPAR yes 90878867
chr4 83707950 83707965 FOXP1 JASPAR yes 90878868
chr4 83707952 83707967 FOXP1 JASPAR yes 90878869
chr4 83707954 83707969 FOXP1 JASPAR yes 90878870
Genes associated with rs554668197[chr4:83707956], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More