EnhancerDB
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  3. rs554671048[chr2:26286268]
Enhancers that have rs554671048[chr2:26286268]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554671048[chr2:26286268]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26286262 26286272 HOXA13 JASPAR yes 72520873
chr2 26286262 26286272 HOXB13 JASPAR yes 72520874
chr2 26286262 26286272 HOXC10 JASPAR yes 72520875
chr2 26286262 26286272 HOXD13 JASPAR yes 72520876
chr2 26286262 26286273 HOXA10 JASPAR yes 72520877
chr2 26286263 26286272 CDX1 JASPAR yes 72520878
chr2 26286263 26286274 CDX2 JASPAR yes 72520879
Genes associated with rs554671048[chr2:26286268], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More