EnhancerDB
  1. Home
  2. SNP
  3. rs554671787[chr1:25055337]
Enhancers that have rs554671787[chr1:25055337]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554671787[chr1:25055337]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25055331 25055352 ZNF263 JASPAR yes 27524186
chr1 25055332 25055341 RUNX2 JASPAR yes 27524187
chr1 25055334 25055354 RREB1 JASPAR yes 27524188
Genes associated with rs554671787[chr1:25055337], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More