EnhancerDB
  1. Home
  2. SNP
  3. rs554678113[chr17:1899690]
Enhancers that have rs554678113[chr17:1899690]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554678113[chr17:1899690]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1899669 1899690 ZNF263 JASPAR yes 52714434
chr17 1899670 1899691 ZNF263 JASPAR yes 52714435
chr17 1899671 1899692 ZNF263 JASPAR yes 52714437
chr17 1899672 1899692 RREB1 JASPAR yes 52714439
chr17 1899677 1899698 ZNF263 JASPAR yes 52714440
chr17 1899679 1899694 NR2C2 JASPAR yes 52714441
chr17 1899680 1899690 SP1 JASPAR yes 52714443
chr17 1899681 1899691 SP1 JASPAR yes 52714444
chr17 1899686 1899695 TFAP2A JASPAR yes 52714445
Genes associated with rs554678113[chr17:1899690], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More